Paxinos & Watson, Edition 2, The Rat Brain PLANE : Sagittal LEVEL : Lateral 0.40 Structure and Stereotaxic Coordinates: STRUCTURE : In - Intercalated nucleus of the medulla COORDINATES : -3.367589 mm, 2.252747 mm STRUCTURE : 4V - 4th ventricle COORDINATES : -2.301186 mm, 3.406593 mm STRUCTURE : MVe - medial vestibular nucleus COORDINATES : -2.301186 mm, 2.857143 mm STRUCTURE : PrH - prepositus hypoglossal nucleus COORDINATES : -2.301186 mm, 2.417582 mm STRUCTURE : DPGi - Dorsal paragigantocellular nucleus COORDINATES : -2.301186 mm, 1.923077 mm STRUCTURE : g7 - Genu of the facial nerve COORDINATES : -1.290909 mm, 2.142857 mm STRUCTURE : 6 - Cerebellar lobules or spinal cord layers COORDINATES : -.95415 mm, 1.978022 mm STRUCTURE : Pa6 - paraabducens nucleus COORDINATES : -.617391 mm, 1.813187 mm STRUCTURE : DMTg - Dorsomedial tegmental area COORDINATES : -.392885 mm, 2.142857 mm STRUCTURE : CGA - Central gray (alpha part) COORDINATES : -.392885 mm, 2.417582 mm STRUCTURE : SGe - supragenual nucleus COORDINATES : -.95415 mm, 2.527473 mm STRUCTURE : PDTg - posterodorsal tegmental nucleus COORDINATES : -.224506 mm, 2.747253 mm STRUCTURE : Sph - sphenoid nucleus COORDINATES : -.168379 mm, 3.131868 mm STRUCTURE : DTgC - Dorsal tegmental nucleus (central part) COORDINATES : 0.280632 mm, 3.076923 mm STRUCTURE : DTgP - Dorsal tegmental nucleus (pericentral part) COORDINATES : 0.449012 mm, 3.296703 mm STRUCTURE : 4x - Trochlear decussation COORDINATES : -.280632 mm, 3.516484 mm STRUCTURE : smv - superior medullary velum COORDINATES : 0.449012 mm, 4.175824 mm STRUCTURE : 4V - 4th ventricle COORDINATES : 0.336759 mm, 3.791209 mm STRUCTURE : Aq - Aqueduct (Sylvius) COORDINATES : 1.178656 mm, 4.945055 mm STRUCTURE : PVP - paraventricular thalamic nucleus (posterior part) COORDINATES : 5.388142 mm, 4.89011 mm STRUCTURE : PF - parafascicular thalamic nucleus COORDINATES : 5.051384 mm, 4.065934 mm STRUCTURE : PrC - precommissural nucleus COORDINATES : 4.826878 mm, 5 mm STRUCTURE : CA1 - Fields CA1 of Ammon's horn COORDINATES : 4.546245 mm, 6.813187 mm STRUCTURE : dhc - Dorsal hippocampal commissure COORDINATES : 4.546245 mm, 7.252747 mm STRUCTURE : scc - splenium of the corpus callosum COORDINATES : 4.041107 mm, 7.692308 mm STRUCTURE : MPT - medial pretectal nucleus COORDINATES : 4.209486 mm, 5.769231 mm STRUCTURE : pc - posterior commissure COORDINATES : 4.097233 mm, 4.945055 mm STRUCTURE : csc - Commissure of the superior colliculus COORDINATES : 3.592095 mm, 5.494505 mm STRUCTURE : CGD - Central gray (dorsal part) COORDINATES : 2.750198 mm, 5.384615 mm STRUCTURE : cic - Commissure of the inferior colliculus COORDINATES : 1.403162 mm, 5.989011 mm STRUCTURE : DpWh - Deep white layer of the superior colliculus COORDINATES : 2.245059 mm, 5.879121 mm STRUCTURE : DpG - Deep gray layer of the superior colliculus COORDINATES : 2.637945 mm, 6.098901 mm STRUCTURE : InWh - Intermediate white layer of the superior colliculus COORDINATES : 2.413439 mm, 6.483516 mm STRUCTURE : InG - Intermediate gray layer of the superior colliculus COORDINATES : 2.750198 mm, 6.538462 mm STRUCTURE : Op - optic nerve layer of the superior colliculus COORDINATES : 2.301186 mm, 6.923077 mm STRUCTURE : SuG - superficial gray layer of the superior colliculus COORDINATES : 2.581818 mm, 7.197802 mm STRUCTURE : Zo - zonal layer of the superior colliculus COORDINATES : 2.469565 mm, 7.472527 mm STRUCTURE : Pi - pineal gland COORDINATES : 1.066403 mm, 8.241758 mm STRUCTURE : DCIC - Dorsal cortex of the inferior colliculus COORDINATES : 0.224506 mm, 6.923077 mm STRUCTURE : SF - secondary fissure COORDINATES : -5.10751 mm, 5.164835 mm STRUCTURE : PPF - prepyramidal fissure COORDINATES : -4.770751 mm, 6.263736 mm STRUCTURE : PSF - posterior superior fissure COORDINATES : -4.658498 mm, 7.032967 mm STRUCTURE : PrF - Primary fissure COORDINATES : -2.862451 mm, 7.362637 mm STRUCTURE : PCF - preculminate fissure COORDINATES : -.95415 mm, 6.593407 mm STRUCTURE : Med - medial (fastigial) cerebellar nucleus COORDINATES : -2.301186 mm, 4.230769 mm STRUCTURE : 1 - Cerebellar lobules or spinal cord layers COORDINATES : -1.290909 mm, 3.351648 mm STRUCTURE : 2 - Cerebellar lobules or spinal cord layers COORDINATES : 0.056126 mm, 4.67033 mm STRUCTURE : 3 - Cerebellar lobules or spinal cord layers COORDINATES : -.336759 mm, 6.043956 mm STRUCTURE : 4 - Cerebellar lobules or spinal cord layers COORDINATES : -.729644 mm, 7.417582 mm STRUCTURE : 5 - Cerebellar lobules or spinal cord layers COORDINATES : -1.178656 mm, 8.406593 mm STRUCTURE : 6 - Cerebellar lobules or spinal cord layers COORDINATES : -3.19921 mm, 8.296703 mm STRUCTURE : 6 - Cerebellar lobules or spinal cord layers COORDINATES : -4.377866 mm, 8.186813 mm STRUCTURE : 6 - Cerebellar lobules or spinal cord layers COORDINATES : -5.163636 mm, 7.637363 mm STRUCTURE : 7 - Cerebellar lobules or spinal cord layers COORDINATES : -5.500395 mm, 6.923077 mm STRUCTURE : 8 - Cerebellar lobules or spinal cord layers COORDINATES : -5.556522 mm, 5.769231 mm STRUCTURE : 9 - Cerebellar lobules or spinal cord layers COORDINATES : -5.444269 mm, 4.725275 mm STRUCTURE : 9 - Cerebellar lobules or spinal cord layers COORDINATES : -5.388142 mm, 3.241758 mm STRUCTURE : PLF - posterolateral fissure COORDINATES : -3.704348 mm, 3.846154 mm STRUCTURE : 10 - Cerebellar lobules or spinal cord layers COORDINATES : -3.760474 mm, 3.076923 mm STRUCTURE : Gr - Gracile nucleus COORDINATES : -5.388142 mm, 2.527473 mm STRUCTURE : Sol - nucleus of the solitary tract COORDINATES : -4.714625 mm, 2.472527 mm STRUCTURE : SolC - nucleus of the solitary tract (commissural part) COORDINATES : -5.612648 mm, 1.758242 mm STRUCTURE : 10 - Cerebellar lobules or spinal cord layers COORDINATES : -4.433992 mm, 2.197802 mm STRUCTURE : 12 - Cerebellar lobules or spinal cord layers COORDINATES : -4.433992 mm, 1.703297 mm STRUCTURE : Ro - nucleus of Roller COORDINATES : -3.872727 mm, 1.593407 mm STRUCTURE : PMn - paramedian reticular nucleus COORDINATES : -4.321739 mm, 0.494505 mm STRUCTURE : pyx - pyramidal decussation COORDINATES : -5.388142 mm, -.32967 mm STRUCTURE : py - pyramidal tract COORDINATES : -2.301186 mm, -.934066 mm STRUCTURE : IO - Inferior olive COORDINATES : -3.704348 mm, -.274725 mm STRUCTURE : IO - Inferior olive COORDINATES : -3.143083 mm, -.164835 mm STRUCTURE : Gi - Gigantocellular reticular nucleus COORDINATES : -2.301186 mm, 0.714286 mm STRUCTURE : GiV - Gigantocellular reticular nucleus (ventral part) COORDINATES : -2.637945 mm, 0 mm STRUCTURE : GiA - Gigantocellular reticular nucleus (alpha part) COORDINATES : -1.459289 mm, -.054945 mm STRUCTURE : PnC - pontine reticular nucleus (caudal part) COORDINATES : -.392885 mm, 0.879121 mm STRUCTURE : PnO - pontine reticular nucleus (oral part) COORDINATES : 0.505138 mm, 1.538462 mm STRUCTURE : RtTgP - reticulotegmental nucleus of the pons (pericentral part) COORDINATES : 1.066403 mm, 1.263736 mm STRUCTURE : ml - medial lemniscus COORDINATES : 0.392885 mm, 0.21978 mm STRUCTURE : PnV - pontine reticular nucleus (ventral part) COORDINATES : -.280632 mm, 0.21978 mm STRUCTURE : tz - trapezoid body COORDINATES : 0.224506 mm, -.21978 mm STRUCTURE : PN - paranigral nucleus COORDINATES : 0.898024 mm, 0.054945 mm STRUCTURE : RtTg - reticulotegmental nucleus of the pons COORDINATES : 1.178656 mm, 0.714286 mm STRUCTURE : ml - medial lemniscus COORDINATES : 2.188933 mm, 0.879121 mm STRUCTURE : lfp - Longitudinal fasciculus of the pons COORDINATES : 1.627668 mm, 0.274725 mm STRUCTURE : PN - paranigral nucleus COORDINATES : 1.852174 mm, -.10989 mm STRUCTURE : tfp - transverse fibers of the pons COORDINATES : 2.806324 mm, 0 mm STRUCTURE : APit - Anterior lobe of the pituitary COORDINATES : 3.311463 mm, -.714286 mm STRUCTURE : IPit - Intermediate lobe of the pituitary COORDINATES : 3.479842 mm, -.054945 mm STRUCTURE : PPit - posterior lobe of the pituitary COORDINATES : 3.311463 mm, 0.164835 mm STRUCTURE : IPF - Interpeduncular fossa COORDINATES : 3.367589 mm, 0.714286 mm STRUCTURE : IP - Interpeduncular nucleus COORDINATES : 2.918577 mm, 1.043956 mm STRUCTURE : PN - paranigral nucleus COORDINATES : 3.255336 mm, 1.483516 mm STRUCTURE : VTA - ventral tegmental area (Tsai) COORDINATES : 3.535968 mm, 1.868132 mm STRUCTURE : PBP - parabrachial pigmented nucleus COORDINATES : 3.704348 mm, 2.197802 mm STRUCTURE : vtgx - ventral tegmental decussation COORDINATES : 2.525692 mm, 1.868132 mm STRUCTURE : scp - superior cerebellar peduncle (brachium conjunctivum) COORDINATES : 2.974704 mm, 2.582418 mm STRUCTURE : dtgx - Dorsal tegmental decussation COORDINATES : 3.143083 mm, 2.857143 mm STRUCTURE : mlf - medial longitudinal fasciculus COORDINATES : 3.086957 mm, 3.296703 mm STRUCTURE : VTg - ventral tegmental nucleus (Gudden) COORDINATES : 0.95415 mm, 2.527473 mm STRUCTURE : PMR - paramedian raphe nucleus COORDINATES : 1.347036 mm, 1.813187 mm STRUCTURE : ATg - Anterior tegmental nucleus COORDINATES : 1.627668 mm, 2.307692 mm STRUCTURE : xscp - decussation of the superior cerebellar peduncle COORDINATES : 1.9083 mm, 2.637363 mm STRUCTURE : CLi - Caudal linear nucleus of the raphe COORDINATES : 1.964427 mm, 3.021978 mm STRUCTURE : mlf - medial longitudinal fasciculus COORDINATES : 1.234783 mm, 3.186813 mm STRUCTURE : LDTg - Laterodorsal tegmental nucleus COORDINATES : 1.010277 mm, 3.736264 mm STRUCTURE : DR - Dorsal raphe nucleus COORDINATES : 1.571542 mm, 3.736264 mm STRUCTURE : 4 - Cerebellar lobules or spinal cord layers COORDINATES : 1.627668 mm, 3.351648 mm STRUCTURE : 3 - Cerebellar lobules or spinal cord layers COORDINATES : 2.525692 mm, 3.516484 mm STRUCTURE : 3PC - Cerebellar lobules or spinal cord layers COORDINATES : 2.750198 mm, 3.846154 mm STRUCTURE : Su3 - supraoculomotor central gray COORDINATES : 2.413439 mm, 4.120879 mm STRUCTURE : CG - Central (periaqueductal) gray COORDINATES : 2.694071 mm, 4.505495 mm STRUCTURE : MA3 - Medial accessory oculomotor nucleus COORDINATES : 3.03083 mm, 3.681319 mm STRUCTURE : Dk - Nucleus of Darkschewitsch COORDINATES : 3.704348 mm, 3.571429 mm STRUCTURE : IMLF - Interstitial nucleus of the medial logitudinal fasciculus COORDINATES : 3.816601 mm, 2.967033 mm STRUCTURE : SPF - subparafascicular thalamic nucleus COORDINATES : 4.995257 mm, 2.967033 mm STRUCTURE : RI - rostral interstitial nucleus of the medial longitudinal fasciculus COORDINATES : 4.377866 mm, 2.802198 mm STRUCTURE : mtg - mammillotegmental tract COORDINATES : 4.433992 mm, 2.087912 mm STRUCTURE : VTAR - ventral tegmental area (rostral part) COORDINATES : 3.98498 mm, 1.538462 mm STRUCTURE : SuM - supramammillary nucleus COORDINATES : 4.490119 mm, 1.428571 mm STRUCTURE : mt - mammillothalamic tract COORDINATES : 4.546245 mm, 1.153846 mm STRUCTURE : mp - mammillary peduncle COORDINATES : 3.872727 mm, 1.153846 mm STRUCTURE : mp - mammillary peduncle COORDINATES : 3.816601 mm, 0.549451 mm STRUCTURE : ML - medial mammillary nucleus (lateral part) COORDINATES : 3.98498 mm, 0.274725 mm STRUCTURE : MM - medial mammillary nucleus (medial part) COORDINATES : 4.490119 mm, 0.43956 mm STRUCTURE : 3V - 3rd ventricle COORDINATES : 4.15336 mm, -.054945 mm STRUCTURE : Arc - Arcuate hypothalamic nucleus COORDINATES : 5.163636 mm, -.164835 mm STRUCTURE : PMD - premammillary nucleus (dorsal part) COORDINATES : 4.939131 mm, 0.824176 mm STRUCTURE : PH - posterior hypothalamic area COORDINATES : 5.275889 mm, 2.032967 mm STRUCTURE : G - Gelatinosus thalamic nucleus COORDINATES : 6.342293 mm, 3.076923 mm STRUCTURE : Rh - rhomboid thalamic nucleus COORDINATES : 6.622925 mm, 3.296703 mm STRUCTURE : AM - Anteromedial thalamic nucleus COORDINATES : 6.959684 mm, 3.736264 mm STRUCTURE : CM - Central medial thalamic nucleus COORDINATES : 6.06166 mm, 3.681319 mm STRUCTURE : MD - Mediodorsal thalamic nucleus COORDINATES : 6.23004 mm, 4.725275 mm STRUCTURE : LHb - Lateral habenular nucleus COORDINATES : 5.837154 mm, 5.32967 mm STRUCTURE : MHb - medial habenular nucleus COORDINATES : 5.556522 mm, 5.659341 mm STRUCTURE : sm - stria medullaris of the thalamus COORDINATES : 7.01581 mm, 5.604396 mm STRUCTURE : sm - stria medullaris of the thalamus COORDINATES : 6.173913 mm, 5.879121 mm STRUCTURE : DG - Dentate gyrus COORDINATES : 6.847431 mm, 5.989011 mm STRUCTURE : PoDG - polymorph layer of the dentate gyrus COORDINATES : 6.622925 mm, 6.318681 mm STRUCTURE : CA3 - Fields CA3 of Ammon's horn COORDINATES : 6.342293 mm, 6.813187 mm STRUCTURE : vhc - ventral hippocampal commissure COORDINATES : 7.577075 mm, 6.043956 mm STRUCTURE : 3V - 3rd ventricle COORDINATES : 7.408696 mm, 5.549451 mm STRUCTURE : SFO - subfornical organ COORDINATES : 7.689328 mm, 5.549451 mm STRUCTURE : PVA - paraventricular thalamic nucleus (anterior part) COORDINATES : 7.352569 mm, 5.10989 mm STRUCTURE : PT - paratenial thalamic nucleus COORDINATES : 7.296443 mm, 4.67033 mm STRUCTURE : PVA - paraventricular thalamic nucleus (anterior part) COORDINATES : 7.689328 mm, 3.571429 mm STRUCTURE : DA - Dorsal hypothalamic area COORDINATES : 6.005534 mm, 1.923077 mm STRUCTURE : Do - Dorsal hypothalamic nucleus COORDINATES : 6.454546 mm, 1.923077 mm STRUCTURE : VRe - ventral reuniens thalamic nucleus COORDINATES : 6.398419 mm, 2.417582 mm STRUCTURE : Re - reuniens thalamic nucleus COORDINATES : 7.240316 mm, 2.912088 mm STRUCTURE : Pa - paraventricular hypothalamic nucleus COORDINATES : 6.959684 mm, 1.978022 mm STRUCTURE : Pa - paraventricular hypothalamic nucleus COORDINATES : 7.240316 mm, 2.032967 mm STRUCTURE : Stg - stigmoid hypothalamic nucleus COORDINATES : 6.679052 mm, 1.758242 mm STRUCTURE : DMD - Dorsomedial hypothalamic nucleus (diffuse part) COORDINATES : 6.173913 mm, 1.428571 mm STRUCTURE : DMC - Dorsomedial hypothalamic nucleus (compact part) COORDINATES : 5.893281 mm, 0.879121 mm STRUCTURE : VMH - ventromedial hypothalamic nucleus COORDINATES : 6.454546 mm, 0.43956 mm STRUCTURE : RCh - retrochiasmatic area COORDINATES : 7.689328 mm, 0.274725 mm STRUCTURE : sox - supraoptic decussation COORDINATES : 7.969961 mm, 0.054945 mm STRUCTURE : AH - Anterior hypothalamic area COORDINATES : 7.352569 mm, 1.373626 mm STRUCTURE : LA - Lateroanterior hypothalamic nucleus COORDINATES : 7.913834 mm, 0.824176 mm STRUCTURE : SCh - suprachiasmatic nucleus COORDINATES : 8.587352 mm, 0.604396 mm STRUCTURE : ox - optic chiasm COORDINATES : 8.587352 mm, 0.274725 mm STRUCTURE : AC - Anterior commissural nucleus COORDINATES : 7.913834 mm, 2.527473 mm STRUCTURE : AC - Anterior commissural nucleus COORDINATES : 8.362846 mm, 2.967033 mm STRUCTURE : SHy - septohypothalamic nucleus COORDINATES : 8.643478 mm, 2.362637 mm STRUCTURE : StHy - striohypothalamic nucleus COORDINATES : 7.913834 mm, 1.813187 mm STRUCTURE : MPOC - medial preoptic nucleus (central part) COORDINATES : 8.194467 mm, 1.703297 mm STRUCTURE : MPO - medial preoptic nucleus COORDINATES : 8.531225 mm, 1.373626 mm STRUCTURE : MPA - medial preoptic area COORDINATES : 8.980237 mm, 1.648352 mm STRUCTURE : AVPO - Anteroventral preoptic nucleus C18-20 COORDINATES : 9.204743 mm, 1.153846 mm STRUCTURE : VDB - nucleus of the vertical limb of the diagonal band COORDINATES : 9.653755 mm, 1.868132 mm STRUCTURE : MS - medial septal nucleus COORDINATES : 8.980237 mm, 3.296703 mm STRUCTURE : f - Fornix COORDINATES : 8.026087 mm, 3.571429 mm STRUCTURE : TS - triangular septal nucleus COORDINATES : 8.194467 mm, 4.835165 mm STRUCTURE : SFi - septofimbrial nucleus COORDINATES : 8.475099 mm, 4.945055 mm STRUCTURE : df - Dorsal fornix COORDINATES : 8.082214 mm, 6.098901 mm STRUCTURE : cc - Corpus callosum COORDINATES : 7.296443 mm, 6.978022 mm STRUCTURE : LSD - Lateral septal nucleus (dorsal part) COORDINATES : 9.148617 mm, 5.714286 mm STRUCTURE : gcc - Genu of the corpus callosum COORDINATES : 9.878261 mm, 5.604396 mm STRUCTURE : IG - Indusium griseum COORDINATES : 10.439526 mm, 5.659341 mm STRUCTURE : TT - tenia tecta COORDINATES : 10.271146 mm, 4.67033 mm STRUCTURE : LSI - Lateral septal nucleus (intermediate part) COORDINATES : 9.373123 mm, 4.010989 mm STRUCTURE : LD - Laterodorsal thalamic nucleus COORDINATES : 9.709882 mm, 3.021978 mm STRUCTURE : Tu - olfactory tubercle COORDINATES : 10.551779 mm, 1.483516 mm STRUCTURE : ICjM - Islands of Calleja (major island) COORDINATES : 10.327273 mm, 2.582418 mm STRUCTURE : AcbSh - Accumbens nucleus (shell) COORDINATES : 10.720158 mm, 2.362637 mm STRUCTURE : ICj - Islands of Calleja COORDINATES : 11.674309 mm, 2.252747 mm STRUCTURE : TT - tenia tecta COORDINATES : 11.898815 mm, 2.747253 mm STRUCTURE : AOM - Anterior olfactory nucleus (medial part) COORDINATES : 12.628459 mm, 3.021978 mm STRUCTURE : TT - tenia tecta COORDINATES : 11.786562 mm, 3.351648 mm STRUCTURE : IGr - Internal granular layer of the olfactory bulb COORDINATES : 13.470356 mm, 4.230769 mm STRUCTURE : EPl - External plexiform layer of the olfactory bulb COORDINATES : 14.256127 mm, 4.89011 mm STRUCTURE : RF - rhinal fissure COORDINATES : 13.750988 mm, 5.934066 mm